Clene Inc. Income Taxes Disclosure
Note 10. Income Taxes
The components of loss before income taxes for the years ended December 31, 2025 and 2024 were as follows:
| Year Ended December 31, | ||||||||
| (in thousands) | 2025 | 2024 | ||||||
| United States | $ | (25,996 | ) | $ | (39,240 | ) | ||
| Foreign | (177 | ) | (160 | ) | ||||
| Net loss before income taxes | $ | (26,173 | ) | $ | (39,400 | ) | ||
We had no income tax expense or benefit for the years ended December 31, 2025 and 2024. Pursuant to our prospective adoption of ASU 2023-09 (see Note 2), the following table presents a reconciliation of income tax computed at the U.S. federal statutory rate of 21.00% to expense for income taxes for the year ended December 31, 2025 as follows:
| Year Ended December 31, | ||||||||
| (in thousands, except tax rates) | 2025 | |||||||
| U.S. Federal statutory tax rate | $ | (5,496 | ) | 21.00 | % | |||
| State and local income tax effects(1) | — | 0.00 | % | |||||
| Foreign tax effects | 37 | (0.14 | )% | |||||
| Tax credits: | ||||||||
| Research and development credits - Federal | (392 | ) | 1.50 | % | ||||
| Changes in valuation allowances | 5,139 | (19.63 | )% | |||||
| Nontaxable or nondeductible items: | ||||||||
| Stock-based compensation | 398 | (1.52 | )% | |||||
| Other | 314 | (1.20 | )% | |||||
| Income tax benefit | $ | — | 0.00 | % | ||||
| (1) | 2025 state taxes in Utah made up the majority (greater than 50%) of the tax effect in this category. |
A reconciliation of income tax computed at the U.S. federal statutory rate of 21.00% to expense for income taxes for the years ended December 31, 2024, prior to the adoption of ASU 2023-09, was as follows:
| Year Ended December 31, | ||||
| (in thousands) | 2024 | |||
| Income tax expense (benefit) at federal statutory rate | $ | (8,270 | ) | |
| State income taxes (net of federal benefit) | (1,012 | ) | ||
| Loss on initial issuance of equity | 473 | |||
| Change in fair value of common stock warrant liabilities | 148 | |||
| Change in fair value of contingent earn-outs | (18 | ) | ||
| Research and development tax credits | (779 | ) | ||
| Stock compensation | 428 | |||
| Foreign rate differential | (11 | ) | ||
| Adjustment for change in tax rate | 269 | |||
| Other | 206 | |||
| Change in valuation allowance | 8,566 | |||
| Income tax benefit | $ | — | ||
Our effective tax rate was 0.00% and 0.00% during the years ended December 31, 2025 and 2024, respectively. The primary difference between the effective tax rate and the federal statutory tax rate relates to the full valuation allowance on our net operating losses and other deferred tax assets. Significant components of deferred tax assets (liabilities) as of December 31, 2025 and 2024 were as follows:
| December 31, | December 31, | |||||||
| (in thousands) | 2025 | 2024 | ||||||
| Deferred tax assets: | ||||||||
| Net operating loss carryforwards | $ | 46,824 | $ | 40,749 | ||||
| Depreciation and amortization | 1,219 | 1,241 | ||||||
| Research and development and employment tax credits | 6,796 | 6,345 | ||||||
| Lease liability | 967 | 1,216 | ||||||
| Capitalized research and development expenses | 7,255 | 8,889 | ||||||
| Non-qualified stock options and restricted stock awards | 8,475 | 7,369 | ||||||
| Accrued compensation | 730 | 970 | ||||||
| Total deferred tax assets | 72,266 | 66,779 | ||||||
| Deferred tax liabilities: | ||||||||
| Right-of-use asset | (732 | ) | (876 | ) | ||||
| Other | (25 | ) | (23 | ) | ||||
| Total deferred tax liabilities | (757 | ) | (899 | ) | ||||
| Less: valuation allowance | (71,509 | ) | (65,880 | ) | ||||
| Net deferred tax assets (liabilities) | $ | — | $ | — | ||||
In assessing the realizability of deferred tax assets, we consider whether it is more likely than not that some portion or all of the deferred tax assets will not be realized. The ultimate realization of deferred tax assets is dependent upon the generation of future taxable income during periods in which those temporary differences become deductible. We consider the scheduled reversal of deferred tax liabilities, projected future taxable income, carry back opportunities and tax planning strategies in making the assessment. We believe it is more likely than not that we will not realize the benefits of these deductible differences and have applied a full valuation allowance against them.
We have federal and state net operating losses (“NOLs”) of approximately $195.7 million and $136.3 million as of December 31, 2025, respectively that, subject to limitation, may be available in future tax years to offset taxable income. Of the available federal NOLs, approximately $162.3 million can be carried forward indefinitely but utilization is limited to 80% of our taxable income in any given tax year based on current federal tax laws. The remaining balance of $33.4 million will begin to expire after 2034. Of the available state NOLs, approximately $123.4 million can be carried forward indefinitely but utilization is limited to 80% of our taxable income in any given tax year based on current tax laws. The remaining balance of $12.9 million will begin to expire after 2032. Additionally, we had approximately $6.7 million of research and development credit carryforwards that will begin to expire after 2034 if not utilized.
Under the provisions of Section 382 of the Internal Revenue Code of 1986, substantial changes in our ownership may result in limitations on the amount of NOL carryforwards and research and development credits that can be utilized in future years. NOL carryforwards and research and development credits are subject to examination in the year they are utilized regardless of whether the tax year in which they are generated has been closed by statute. The amount subject to disallowance is limited to the amount utilized. Accordingly, we may be subject to examination for prior NOLs and credits generated as such tax attributes are utilized.
We have recorded any amounts for unrecognized tax benefits as of December 31, 2025 and 2024. We recognize interest and penalties related to income tax matters in income tax expense. We have accrual of interest and penalties on the consolidated balance sheets and have recognized interest and penalties in the consolidated statements of operations and comprehensive loss for the years ended December 31, 2025 and 2024.
We are subject to taxation in the U.S., Australia, Netherlands, and various state jurisdictions. Our tax returns from 2015 to present are subject to examination by U.S. and state authorities due to the carry forward of unutilized net operating losses and research and development credits. We currently have no pending examinations.
Historical Timeline
| Fiscal Year | Filed | |
|---|---|---|
| 2025 | Mar 17, 2026 | Showing above |
| 2024 | Mar 24, 2025 | |
| 2023 | Mar 13, 2024 | |
| 2022 | Mar 13, 2023 | |
| 2021 | Mar 11, 2022 | |
| 2020 | Mar 29, 2021 | |
About Income Taxes Disclosures
The income tax disclosure reveals how much a company actually pays in taxes versus what the statutory rate would predict. Analysts focus on the effective tax rate (ETR) reconciliation, which breaks down every item driving the gap between the 21% federal rate and the company's reported ETR — including R&D credits, foreign rate differentials, and state taxes. Deferred tax assets (DTAs) and their valuation allowances signal management's confidence in future profitability: a rising allowance suggests the company doubts it can use accumulated tax benefits. Uncertain tax benefit (UTB) reserves quantify exposure to IRS challenges on aggressive positions.
Key signals to watch: sudden ETR drops without clear operational reasons, large increases in valuation allowances, growing UTB balances, and significant unremitted foreign earnings. Post-TCJA, pay attention to GILTI and BEAT provisions that affect multinational tax structures. Compare the cash taxes paid (from the cash flow statement) against the income tax provision to gauge earnings quality.